taxname=; mxram 4096; taxname +23; nstates num 32; xread 'File downloaded from graemetlloyd.com' 399 34 & [numeric] Outgroup 000[01]000000000000000000000000000000000[01]0[01][01][01]0000[01]0000000[04]0000000000?0000000000000000000000000000000000000[01]0000000000000[02]000[01][01]0[02]??000?000000000000[01]00000[01]00000000000?0000000????000[01]00000000000?0[01]000000000000[01]000000000000000000000000000000000??000?00[02]000000?0?0000000000000000000000000000??????000000000000000?00000000000000000000000000??0000000?0000000000000000000000??000000000?000?00000000?0000000?00? Iguanidae 100000[01]00000000101000001000110[12]0000001[01]01[12]000010001100100[01]0000000?000000000000000000[01]0100[01]0000000000000000000[01]1000[01]002[012][01]0[12]10[012][01]000[01]0110000[01][01]10002000[01]00000000000010000[01]0[01]00010110[01]11[01]0000[01]00[01]10[01][01][01]0001000000[01]1[01]00[01]0000[01]0[012][01]00000000100000000000??[01]0[12]0[01]000010[01]0?10[01]00000[01]0[01]0000[01]0[01]00000000101000[01]0000100[01]0010000000?000000101[01]1000[01]10000000010??000[01]0010000000011001011?000002010[01]0012000?2021[12]0000000?0[01]000001101 Leiolepidinae 1000011000[01]00001010000010001102?000001001[12]00001000110010010000000?0000000000000000101010000000000000000100000[01]11000002000?102?0000010000001100020001000100002??0101001?1?0[01]101101?1000000100?01?0000100000001[01]00[01]0000110000000000100000000000??0020[01]00001010?101000???????00?0000000000101000[01]001???010010000000?00000111?????0010000000010??000200100000000110??0100??00020?0[01]0?????????????0001???????000??0? Agaminae 1000011000[01]0100[01]010000010001102?00000100120000100011001001000[01]000?0000000000000000101010000000000000000100000011000002000?10[12]1000001000000110002000[01]000100002??010[01]001?1?00101101?1[01]00000[12]00?01?000010000000100000000111000000000100000000000??[01]020100001000?1010000010[01]000000[01]200000001010000001010010010000000?00000011?00000010000000010??0002001000000001100101000000020?0001111?10201?[13]0000100?00?00001101 Chamaeleonidae 10??010000[01]010010100[01]011[01]0[01]0102?000001[01][01]2[01]10001000110010210000000?00000000001000000020100????01001000001[01][01]100111001002000?102??000?0000000[01]10002[01]00[01]00[01]100002??1101001?1?00101101?1110000000?01?000010000001001??1??0[01]?3101000010100010000000??[01]020110001000?0?000000101000020100000000001000000101011?000000000?00000011?01000000000000010??0002001000000001100?0[01]00000012011002?0100?212120000100?00?00001101 Polyglyphanodon 10010000?0000001000001020101?100100001?0110000100012001001000?000?00000?00??000?00?000100????0001000000?010110110??002????00110000011??0000?100[12]0000000100002??0100001?1??0101100113[01]0000000?00000001000000010011001?????00000000100001[01]00000??0?????0?0??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Macrocephalosaurus 10010000110000010100000[01]01010000000001?0[01]20000[01]000120010010001000?00000100000??000001010001010001000000?01012001110002???000110000010000000110010001000000000000100001?1??010110011??0000?00?00000001000000?11011001?????00000001100001000000??2?????0????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Xantusiidae 1001000000?00000010001000[01]0[01]010?101?0[01]0[01]0211000110110010010001[01]0100000110100000000[01]0101100101[01]1010000000010[01][01]1100000012?00101100000110[01]?1?0110000000000000000000100001?1?00101101?[01][23]00000[01]0[01]1000000010000000100110010[01]01000000111100001000000??[01]010000100110?1110000?1??00[01]000011100000210100100?00100[01]001001020000111200?10100110010010000??0010101000000001[01]00200??000?02001002?0??????????1010???????120?001 Eublepharinae 00010000001000000100010000010100101?201102001??100[01]10030010001100?00001101000010011010110010100010000000010[01]01100000022?0010100001011000010100020101011000000000100001?1?10110101?0200000000?001000010000001100110010[01]01000000001100001000000??0001000110010?111[01]0????????00?100?001101200010100000?0011210101101111012000????0110000010000??00101010010001010001002?0000010?101002??????????101000?[01]1?[01]020?00? Gekkonines_s_dot_l_dot_ 1001000000100000010001000[01]010100101?2111?2001??1000???30010001100?000011010000[01]001101011001010[01]0[01]0000000010101100000022?0010[12]00001011000[01]10100020101011000000000100001?1?10?10001?0[02]00000000?0010000100000011[01]01100100?10000000[01][01]100001000000??00[01]1000110010?11[01]21000[01]000100[12]100?0111012000101000001001121010110111101200010100110000011000??001010100100010101010[01]20000?0[01]0?[01]01002011101204011100??00?00201011 Diplodactylinae 00010000001000000100000000010100101?2111?2001??1000???30010001100?00001101000000011010110010100010000000010101101000022?00101000010110001?0100020101011000000000100001?1?10?10[01]01?0[02]00000000?0010000100000011001100100?[12]000000011100001000000??0001000110010?11[01]21?000?00?00?100?01120??0?0101000??10011210101101111?12?0??010011000001???0??00101010??0?010101010020000?000?10100201110120401110??????0[01]201001 Pygopodidae 000[01]00000010000001000[01]0000[01][01]010?101?2011?2001??1000???30010001100?00001101000000010010110010100010000010010[01]01101000022?00[01]01000010110001?010002011101[01]000000000100001?1?10110101?[01]410000000?00100000100001?100101??00?302?0?1[01]1???1?????0000??0001000?10111111[01]??0001000?0[01]11?0?111201200010011?[01]01?01121010110111101200?10100110000010000??0010101001000101010111??00000000?[01]10020???2121311110?11???0020??01 Sineoamphisbaena ?0??00001000?00100000001011?010100000011?2000011100???11?100011110[02]?1???000?11??01?0[12]00100101?0?100010000101210??1?0?2????00???0?1????000?0???0[12]00?????100002??0110111?1??0101101?1?00??000????????0100???0?1????0???????0000????????????0000??2?????00???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Dibamidae 100000000010001?0?00010001000[01][12]?101?2111?00[01]1??1000???302[01]000110110?00012001111001202101101012011001100001?1101?00[01]0002?00002??010?[01]000?1?0100000001011000001000110[12]11?1?10101111?1[45]10[01]12000?101000001110?1???1??1??00?312?0?1[01]0???1?????0000??01??110?0011110?10?1110011121???00??0??011????????00???0??00000???0?11??00110200100000020??0???0100?0?0000001??2012?????0?010??0???????????????0?????????011??1? Amphisbaenia 10010000[01][01]1000[01]101000100010[01]002?001?[02]11100[01][01]1??1000???3[01]210001111122121120011100[01]1202[01]011010110110001000010122[01][01]?[01][01]000[012]10[12]10[12]100[01]00[01]00[01]0[01]00?000[012][01]011011[01]0000100[01]11[01]221?1?00101111?1[45]10[01]12000?1[01]1?10001110?[012]000[01]1?1??[01]0?30[12]100111???2?????0000??[02][01]2?1[01]010011100?[01]001110001111??100?10000210000110???10?1010200000?001[01]2200010000141100020001100010002?0000?011?201200?00[01]01200?[01]0[02]12110?2120[13]0?0101100?1[01][01]01??0? Lacertidae 100100100000000[01]0[01]0001000101000?111?01000210000101110010000001000?0000110000000000101010001010001000000001000[01]100000020[01]001000000101100001011012000000000000000010[01]001?[01]00010110001[023]0000[01][01]0[01]1000000010000000100110010101[01]000000021000010000010020[12]0000100110?1110000000000000012110000021000010001001000100010100001012001101000311000100010020100010000100011001001000000201000101100?102050001011011?10000000 Teiidae 100100100000000101000[01]0000010[01]0[01]100101000[01]0000[01]100110[01]100000000010000011000000000000[12]01000101000100000000101001[01]000002[01]0001000000101100001012012000000000000[01]00010[01][01]01?[01]00[01]10110011[023]00000101100000001000000[01]110110010101001000102100001000000??[02]0100[01]0100110?11[01]00000100000000022100000210101????21011002100101000011210011010[01]041100010001101110001000101001100100[01]?0000020001001[01]100?202010001011011110000000 Gymnophthalmidae 1000001000[01]0000101000[01]000001000010010101?[12]000001[01]0110010000001[01]0100000110[01]0000000000101000101[01]001000000001000011000002[02]00[01][01]0[01][01]000101100001012012000000[01]00000[01]000100001?100010110011[023]00000[12]011000000010000000110110010101001000112100001000000??[02]0[12]01[01]010011[01]011[01]00000?000000?002210??00210101????21?111?210010?????1??????1010004110001000110111000100010100110??00[02]???0?0200010???000?0021[13]000101101???0000?0? Cordylidae 100[01]00000000000[01]010000000[01]010[01]001[01]0101[01][01]02[01]000011011001001000100100000110000000100[01]0101000101000100000000100011[01]00000100001000000101101001010002001[01]111000000000100001?[01]0001011[01]1?1[23][01]0000000?000000010000000100[01][01]00100?[12][01]000001021000010001120020200[01]010011101110000000[01]000000000100000210100000??000[01]0001000021?0?101100[01]10100010010000001012010001100010001100100??000?02000?0?????????????0010110[01]1?[01][01]000?0? Scincidae [01]001000000[01]0000[01]01000[01]000101010[01]1[01][01]101[01]0020000010111001001000100[01]000001100000[01]0100[01]0[01][01]1000101[01][01]0100100000100011[01]000001[012]00010[01]0000101[01]010010100[01]2001111100000[01]000100001?[01]000101101?130000[12]00[01]00[01]000001000000[01]10011[01]010[01]?1[01]00000[01]1210000100011200[02]0[12]0[01][01]01001111[01]10000[01]00001[01][12]000000100000210102?0??100001001000021?01101100110100010010000001011010001100010001100100?0000?0200100111[01][01][01]0[012][01]2[01][12]000101111111[01]000000 Anguidae 100100000000000101[01]00[01]000[01][01]1010[01]110101100[12]000001[01]0[01]10010[01]1000100[01]1000011[01]0010[01]0[01]001000100010110010000000010[01]011000000[12]001110[01]000010110[01]001010002001101100[01]0010001000010[01]000101101?1[34][01]0[01]0200[01]00[01]00000[01]00000[01][01]10011[01]0100?[12]0[012]000[01]1[01]210[01]00100011200[01]0[12]0[01]10100111[01][01]10000[01]0[01]010[01][01]000000[01]00010210000[01][01][01]?100001010000000?001111000[01]0110020001010000??00100110000000011000001?[01][01]000200[01]00002??????????001011111?1[01]0[01]000? Xenosaurus 10000000000000010010000000010101110101100210011000110010010001000?0000111001000100001010001011001000000001100110000001001110000001011000010100022001001000001000100001?1000101101?1300002000?0100000100000001001000100?1000000101100001000102102010110100010?0?00000??0?0000?0000100010210000000?10?000000000000??????????????0020001010000??001000100000000110??011???0?020?0?0?????????????00?0??0????100??0? Shinisaurus 10000000000000010010000000010101110101100100010100110010010001000?0000111001000100101010001011000000000001100110000001001110000001011000010100022001001000001000100001?0000101101?1000002000?0000000100000001001000100?1000000111100001000102102010110100010?0?0000???????00??000100?1??1?????????????????????????????????????00200?10???????0???????????000?10??011?????020????????????????????????????1????0? Heloderma 100100000000000101000000011?010?001?0111?2001??100110110000001100?000011100100010010001000101100110000100101011000000200121011100101110000010002001100101110110010111[01]00000101101?130000[12]000?01?0010100000000001001?00?1000000011100001000102101020010100010?1100000????0000?0100100010210000100?200110000000000???11?1????0110031001010000??00100110000000011001021?11011200010[01]0[12]??????????001011012110000000 Lanthanotus 101000010101000101001020011?010?101?0111?1001??100110110110001000?0000111011000?01111010001011001000001001010110000002001210121010011200000000020011001011101100101110000?1201101?132010[12]000?01?1010100000001001000100?3000000011100001000102110020110100010?0?00000????0000?010010??102?0000000?20?100?001000??????1??????0111041101011100??002???2?10000001101?011?????12100?0?????????????00?0?1?????0?0??0? Varanus 101000010101000101001?2001010101110111100100000100110110110001100?0000110011000101011010001011001100001000010111000002001210011000011200000000020011001011101100101111?1?02201101?1320102000?01?101010000000110[01]000[01]0[01]?200000000[01]100001000[01]0[02]11[01]000110100010?11000001111000000102100010210000000021010000010[01]000?002220[01]01101110411011112?0??002???2?100000011011021111111211010[01]1[12]1110202010001011012110000000 Aigialosauridae 11??0?01010??1011101??2010[01]10[01]0?1??101?001?000010011?1?20?111??????00???????????11??????0?????????????????0????????10201??0102?110?0020100010101002101?21111?1?1???00?????0101100113211?0000?01?101000001100000?000?00?0001110[02]1100011?110000??0?????1????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????2???? Mosasauridae 111000010100010111010?2010000[01]011[01]01011001?0000000111122011111001100001100110001110020100111100011000010010[01]0010100102011?0102?1101002010001010100210112111111110?1001?01?0[01]1110011321110000?01?101000001100[01]00?001?00?000111021[01]00011?110000??0010??2?0??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????2???? Dolichosauridae ????0?0101?????????0???0?00101???0??????0?????????????????????0??????????????????????????1??????????????????????????02111?0??2??01000???000?0??????????200?0111????00?????010110011[345]301?2000?01??010?000??1?00???1??0????1???1?????111???0000??0??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????2???? Adriosaurus 1???1?010[01]0??0?????????00101?[01]0?10?0?1?0010?0???0010?1??????????11??????????????????2????????????????????????1????0????????????????????0??????0?001101????10???1??1[01]??????01???00?1330????10?01?1011?000111??????????????111112110111??110000??0??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????2???? Pachyrhachis 10??1000001?0001010???20011??00110000111?0011???0010?123210?0??0111121?1?????00?1???21??11???2?0??1001001100011?10?11201??2202??0010030?000101001??????22110?1?1???000101?00??100?1530102010?01????1?0011?2???1??1??1???02?0?12110111??111000??01????2?0??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????2???? Haasiophis 10??10?0001??0?????00??00100?0???0???1?1?0011???0010112021000?2?111??111???????0????21??1?????001?10010?1??0011?10?11201??2202?10000030?000?01001??????2?110???1???000101??????0???63?1???1????????0???21?2???1??1??1????2?0?12????11??1110?0??01????2????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Serpentes 101[01]10000[01]10001???00[01]01001[01][01]00[02][01][01]0[01]0[12]111?0011???00101[01][23][12]210[01]0120111121112011[01][01]0011002110111112001[01]1001[01]011?0011[01]101112011?22[012]21[01]001003[01]?[01]0000[01]00[012]01100122[01]101[01]110?1[012][012][01]1[01]10[01][01][01]1110116?0[01][01]2000?01??11000110?2???1??1??1???02???[12]21???[12]?????0000??01??112?00[01]1110?00?1111110[01][012]1???00010010210000001?20[01]??0000000000?012221001[01]00[01]10411011112?0??002???2?100000001[12]011[02]111[01]121000?102?2000?12213100101111211[01]0[01]0?00 Mesoleptos ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????00?1100?13?01?200????????1?0001?10110?0????????1???1?????1?????100?????????2????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? ; ccode -[/1 0 -[/1 1 -[/1 2 -[/1 3 -[/1 4 -[/1 5 -[/1 6 -[/1 7 -[/1 8 -[/1 9 -[/1 10 -[/1 11 -[/1 12 -[/1 13 -[/1 14 -[/1 15 -[/1 16 -[/1 17 -[/1 18 -[/1 19 -[/1 20 -[/1 21 -[/1 22 -[/1 23 -[/1 24 -[/1 25 -[/1 26 -[/1 27 -[/1 28 -[/1 29 -[/1 30 -[/1 31 -[/1 32 -[/1 33 -[/1 34 -[/1 35 -[/1 36 -[/1 37 -[/1 38 -[/1 39 -[/1 40 -[/1 41 -[/1 42 -[/1 43 -[/1 44 -[/1 45 -[/1 46 -[/1 47 -[/1 48 -[/1 49 -[/1 50 -[/1 51 -[/1 52 -[/1 53 -[/1 54 -[/1 55 -[/1 56 -[/1 57 -[/1 58 -[/1 59 -[/1 60 -[/1 61 -[/1 62 -[/1 63 -[/1 64 -[/1 65 -[/1 66 -[/1 67 -[/1 68 -[/1 69 -[/1 70 -[/1 71 -[/1 72 -[/1 73 -[/1 74 -[/1 75 -[/1 76 -[/1 77 -[/1 78 -[/1 79 -[/1 80 -[/1 81 -[/1 82 -[/1 83 -[/1 84 -[/1 85 -[/1 86 -[/1 87 -[/1 88 -[/1 89 -[/1 90 -[/1 91 -[/1 92 -[/1 93 -[/1 94 -[/1 95 -[/1 96 -[/1 97 -[/1 98 -[/1 99 -[/1 100 -[/1 101 -[/1 102 -[/1 103 -[/1 104 -[/1 105 -[/1 106 -[/1 107 -[/1 108 -[/1 109 -[/1 110 -[/1 111 -[/1 112 -[/1 113 -[/1 114 -[/1 115 -[/1 116 -[/1 117 -[/1 118 -[/1 119 -[/1 120 -[/1 121 -[/1 122 -[/1 123 -[/1 124 -[/1 125 -[/1 126 -[/1 127 -[/1 128 -[/1 129 -[/1 130 -[/1 131 -[/1 132 -[/1 133 -[/1 134 -[/1 135 -[/1 136 -[/1 137 -[/1 138 -[/1 139 -[/1 140 -[/1 141 -[/1 142 -[/1 143 -[/1 144 -[/1 145 -[/1 146 -[/1 147 -[/1 148 -[/1 149 -[/1 150 -[/1 151 -[/1 152 -[/1 153 -[/1 154 -[/1 155 -[/1 156 -[/1 157 -[/1 158 -[/1 159 -[/1 160 -[/1 161 -[/1 162 -[/1 163 -[/1 164 -[/1 165 -[/1 166 -[/1 167 -[/1 168 -[/1 169 -[/1 170 -[/1 171 -[/1 172 -[/1 173 -[/1 174 -[/1 175 -[/1 176 -[/1 177 -[/1 178 -[/1 179 -[/1 180 -[/1 181 -[/1 182 -[/1 183 -[/1 184 -[/1 185 -[/1 186 -[/1 187 -[/1 188 -[/1 189 -[/1 190 -[/1 191 -[/1 192 -[/1 193 -[/1 194 -[/1 195 -[/1 196 -[/1 197 -[/1 198 -[/1 199 -[/1 200 -[/1 201 -[/1 202 -[/1 203 -[/1 204 -[/1 205 -[/1 206 -[/1 207 -[/1 208 -[/1 209 -[/1 210 -[/1 211 -[/1 212 -[/1 213 -[/1 214 -[/1 215 -[/1 216 -[/1 217 -[/1 218 -[/1 219 -[/1 220 -[/1 221 -[/1 222 -[/1 223 -[/1 224 -[/1 225 -[/1 226 -[/1 227 -[/1 228 -[/1 229 -[/1 230 -[/1 231 -[/1 232 -[/1 233 -[/1 234 -[/1 235 -[/1 236 -[/1 237 -[/1 238 -[/1 239 -[/1 240 -[/1 241 -[/1 242 -[/1 243 -[/1 244 -[/1 245 -[/1 246 -[/1 247 -[/1 248 -[/1 249 -[/1 250 -[/1 251 -[/1 252 -[/1 253 -[/1 254 -[/1 255 -[/1 256 -[/1 257 -[/1 258 -[/1 259 -[/1 260 -[/1 261 -[/1 262 -[/1 263 -[/1 264 -[/1 265 -[/1 266 -[/1 267 -[/1 268 -[/1 269 -[/1 270 -[/1 271 -[/1 272 -[/1 273 -[/1 274 -[/1 275 -[/1 276 -[/1 277 -[/1 278 -[/1 279 -[/1 280 -[/1 281 -[/1 282 -[/1 283 -[/1 284 -[/1 285 -[/1 286 -[/1 287 -[/1 288 -[/1 289 -[/1 290 -[/1 291 -[/1 292 -[/1 293 -[/1 294 -[/1 295 -[/1 296 -[/1 297 -[/1 298 -[/1 299 -[/1 300 -[/1 301 -[/1 302 -[/1 303 -[/1 304 -[/1 305 -[/1 306 -[/1 307 -[/1 308 -[/1 309 -[/1 310 -[/1 311 -[/1 312 -[/1 313 -[/1 314 -[/1 315 -[/1 316 -[/1 317 -[/1 318 -[/1 319 -[/1 320 -[/1 321 -[/1 322 -[/1 323 -[/1 324 -[/1 325 -[/1 326 -[/1 327 -[/1 328 -[/1 329 -[/1 330 -[/1 331 -[/1 332 -[/1 333 -[/1 334 -[/1 335 -[/1 336 -[/1 337 -[/1 338 -[/1 339 -[/1 340 -[/1 341 -[/1 342 -[/1 343 -[/1 344 -[/1 345 -[/1 346 -[/1 347 -[/1 348 -[/1 349 -[/1 350 -[/1 351 -[/1 352 -[/1 353 -[/1 354 -[/1 355 -[/1 356 -[/1 357 -[/1 358 -[/1 359 -[/1 360 -[/1 361 -[/1 362 -[/1 363 -[/1 364 -[/1 365 -[/1 366 -[/1 367 -[/1 368 -[/1 369 -[/1 370 -[/1 371 -[/1 372 -[/1 373 -[/1 374 -[/1 375 -[/1 376 -[/1 377 -[/1 378 -[/1 379 -[/1 380 -[/1 381 -[/1 382 -[/1 383 -[/1 384 -[/1 385 -[/1 386 -[/1 387 -[/1 388 -[/1 389 -[/1 390 -[/1 391 -[/1 392 -[/1 393 -[/1 394 -[/1 395 -[/1 396 -[/1 397 -[/1 398 ; smatrix = 0 (step_A) 0>0 0 0>1 1 0>2 1 0>3 2 0>4 3 0>5 4 0>6 5 1>0 1 1>1 0 1>2 2 1>3 3 1>4 4 1>5 5 1>6 6 2>0 1 2>1 2 2>2 0 2>3 1 2>4 2 2>5 3 2>6 4 3>0 2 3>1 3 3>2 1 3>3 0 3>4 1 3>5 2 3>6 3 4>0 3 4>1 4 4>2 2 4>3 1 4>4 0 4>5 1 4>6 2 5>0 4 5>1 5 5>2 3 5>3 2 5>4 1 5>5 0 5>6 1 6>0 5 6>1 6 6>2 4 6>3 3 6>4 2 6>5 1 6>6 0 ; smatrix + step_A 55 109 144 179 222; ccode ( 55 109 144 179 222; proc/;